Need some help with vancouver.bst
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Ahh! I was just about to hit "send" with an email saying the same thing Christiaan says. Try it again without the url and see if it works---it's almost certain that it will---and then you'll know that you have to add \usepackage{url} (or something that does the same thing) to the template file.
Adam On Dec 23, 2010, at 7:22 PM, Christiaan Hofman wrote: > Did you read the warning in the log? It says you probably need a \usepackage. You need one to define the \url command, as noted by the error message in the log. > > Christiaan > > On Dec 24, 2010, at 1:00, Rafael Cruz wrote: > >> >> Hi, >> >> I'm willing to use vancouver.bst as my BibDesk preview style. Here what I >> did: >> >> * Installed MacTex-2010 (http://www.tug.org/mactex/) >> * Downloaded vancouver.bst >> (http://www.ctan.org/tex-archive/biblio/bibtex/contrib/vancouver/) >> * Manually created ~/Library/texfm/bibtex/bst/ >> * Moved vancouver.bst to the folder above. >> * BibDesk Preferences>Tex Preview>BibTex style "vancouver" (without >> cotes). >> >> >> When I tried to use preview I got ***** ERROR: unable to create preview >> ***** >> >> Can I get some help? Thanks in advance. >> >> PS: Sorry if its a beginner issue, I'm new to BibDesk/Tex. >> >> Log output: >> >> TeX preview generation failed. Please review the log below to determine >> the cause. >> >> ***** WARNING: You are using a non-standard BibTeX style ***** >> The style "vancouver" may require additional \usepackage commands to >> function correctly. >> >> ---------- TeX log file ---------- >> File: >> "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.log" >> This is pdfTeX, Version 3.1415926-1.40.11 (TeX Live 2010) >> (format=pdflatex 2010.12.15) 17 DEC 2010 09:43 >> entering extended mode >> restricted \write18 enabled. >> %&-line parsing enabled. >> **bibpreview >> (./bibpreview.tex >> LaTeX2e <2009/09/24> >> Babel <v3.8l> and hyphenation patterns for english, dumylang, >> nohyphenation, ge >> rman-x-2009-06-19, ngerman-x-2009-06-19, ancientgreek, ibycus, arabic, >> armenian >> , basque, bulgarian, catalan, pinyin, coptic, croatian, czech, danish, >> dutch, u >> kenglish, usenglishmax, esperanto, estonian, farsi, finnish, french, >> galician, >> german, ngerman, swissgerman, monogreek, greek, hungarian, icelandic, >> assamese, >> bengali, gujarati, hindi, kannada, malayalam, marathi, oriya, panjabi, >> tamil, >> telugu, indonesian, interlingua, irish, italian, kurmanji, lao, latin, >> latvian, >> lithuanian, mongolian, mongolianlmc, bokmal, nynorsk, polish, >> portuguese, roma >> nian, russian, sanskrit, serbian, slovak, slovenian, spanish, swedish, >> turkish, >> turkmen, ukrainian, uppersorbian, welsh, loaded. >> (/usr/local/texlive/2010/texmf-dist/tex/latex/base/article.cls >> Document Class: article 2007/10/19 v1.4h Standard LaTeX document class >> (/usr/local/texlive/2010/texmf-dist/tex/latex/base/size10.clo >> File: size10.clo 2007/10/19 v1.4h Standard LaTeX file (size option) >> ) >> \c@part=\count79 >> \c@section=\count80 >> \c@subsection=\count81 >> \c@subsubsection=\count82 >> \c@paragraph=\count83 >> \c@subparagraph=\count84 >> \c@figure=\count85 >> \c@table=\count86 >> \abovecaptionskip=\skip41 >> \belowcaptionskip=\skip42 >> \bibindent=\dimen102 >> ) (./bibpreview.aux) >> \openout1 = `bibpreview.aux'. >> >> LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 14. >> LaTeX Font Info: ... okay on input line 14. >> LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 14. >> LaTeX Font Info: ... okay on input line 14. >> LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 14. >> LaTeX Font Info: ... okay on input line 14. >> LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 14. >> LaTeX Font Info: ... okay on input line 14. >> LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 14. >> LaTeX Font Info: ... okay on input line 14. >> LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 14. >> LaTeX Font Info: ... okay on input line 14. >> (./bibpreview.bbl >> ! Undefined control sequence. >> l.9 \newblock Available from: \url >> >> {http://www.ncbi.nlm.nih.gov/pubmed/201482... >> The control sequence at the end of the top line >> of your error message was never \def'ed. If you have >> misspelled it (e.g., `\hobx'), type `I' and the correct >> spelling (e.g., `I\hbox'). Otherwise just continue, >> and I'll forget about whatever was undefined. >> >> >> Underfull \hbox (badness 2932) in paragraph at lines 4--10 >> []\OT1/cmr/m/n/10 Hardie AD, Naik M, Hecht EM, Chan-darana H, Man-nelli >> L, Babb >> JS, et al. Di-ag-no- >> [] >> >> >> Underfull \hbox (badness 1931) in paragraph at lines 4--10 >> \OT1/cmr/m/n/10 sis of liver metas-tases: value of diffusion-weighted >> MRI com-p >> ared with gadolinium-enhanced >> [] >> >> >> Underfull \hbox (badness 2158) in paragraph at lines 4--10 >> \OT1/cmr/m/n/10 MRI. Eu-ro-pean Ra-di-ol-ogy. 2010 >> Jun;20(6):1431--1441. PMID >> : 20148251. Avail-able from: >> [] >> >> ) [1 >> >> {/usr/local/texlive/2010/texmf-var/fonts/map/pdftex/updmap/pdftex.map}] >> (./bibp >> review.aux) ) >> Here is how much of TeX's memory you used: >> 212 strings out of 493747 >> 2328 string characters out of 3143545 >> 49070 words of memory out of 3000000 >> 3585 multiletter control sequences out of 15000+200000 >> 4245 words of font info for 16 fonts, out of 3000000 for 9000 >> 714 hyphenation exceptions out of 8191 >> 23i,4n,19p,154b,108s stack positions out of >> 5000i,500n,10000p,200000b,50000s >> </usr/local/texlive/2010/texmf-dist/fonts/type1/public/amsfonts/cm >> /cmr10.pfb> >> Output written on bibpreview.pdf (1 page, 21247 bytes). >> PDF statistics: >> 12 PDF objects out of 1000 (max. 8388607) >> 7 compressed objects within 1 object stream >> 0 named destinations out of 1000 (max. 500000) >> 1 words of extra memory for PDF output out of 10000 (max. 10000000) >> >> >> >> ---------- BibTeX log file ------- >> File: >> "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.blg" >> This is BibTeX, Version 0.99d (TeX Live 2010) >> Capacity: max_strings=35307, hash_size=35307, hash_prime=30011 >> The top-level auxiliary file: bibpreview.aux >> The style file: vancouver.bst >> Reallocated glb_str_ptr (elt_size=4) to 20 items from 10. >> Reallocated global_strs (elt_size=5001) to 20 items from 10. >> Reallocated glb_str_end (elt_size=4) to 20 items from 10. >> Reallocated wiz_functions (elt_size=4) to 6000 items from 3000. >> Database file #1: bibpreview.bib >> You've used 1 entry, >> 3146 wiz_defined-function locations, >> 645 strings with 4804 characters, >> and the built_in function-call counts, 2664 in all, are: >> = -- 274 >>> -- 28 >> < -- 0 >> + -- 14 >> - -- 7 >> * -- 253 >> := -- 327 >> add.period$ -- 6 >> call.type$ -- 1 >> change.case$ -- 0 >> chr.to.int$ -- 0 >> cite$ -- 1 >> duplicate$ -- 139 >> empty$ -- 277 >> format.name$ -- 8 >> if$ -- 592 >> int.to.chr$ -- 0 >> int.to.str$ -- 1 >> missing$ -- 16 >> newline$ -- 10 >> num.names$ -- 1 >> pop$ -- 20 >> preamble$ -- 1 >> purify$ -- 0 >> quote$ -- 0 >> skip$ -- 28 >> stack$ -- 0 >> substring$ -- 591 >> swap$ -- 37 >> text.length$ -- 0 >> text.prefix$ -- 0 >> top$ -- 0 >> type$ -- 0 >> warning$ -- 0 >> while$ -- 13 >> width$ -- 2 >> write$ -- 17 >> >> >> ---------- BibDesk info ---------- >> <BDSKTeXTask: 0x6bdd40> { >> ivars: >> delegate = "(null)" >> file name = "bibpreview" >> template = "/Users/LaaZ/Library/Application >> Support/BibDesk/previewtemplate.tex" >> TeX file = >> "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.tex" >> BibTeX file = >> "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.bib" >> TeX binary path = "/usr/texbin" >> Encoding = "Western (ASCII)" >> BibTeX style = "vancouver" >> Helper files = ( >> ) >> >> environment: >> SHELL = "/bin/bash" >> BIBINPUTS = "(null)" >> BSTINPUTS = "(null)" >> PATH = "/usr/bin:/bin:/usr/sbin:/sbin:/usr/texbin:/usr/texbin" } >> >> -- >> View this message in context: http://bibdesk-users.661331.n2.nabble.com/Need-some-help-with-vancouver-bst-tp5862925p5862925.html >> Sent from the bibdesk users mailing list archive at Nabble.com. > > > ------------------------------------------------------------------------------ > Learn how Oracle Real Application Clusters (RAC) One Node allows customers > to consolidate database storage, standardize their database environment, and, > should the need arise, upgrade to a full multi-node Oracle RAC database > without downtime or disruption > http://p.sf.net/sfu/oracle-sfdevnl > _______________________________________________ > Bibdesk-users mailing list > [hidden email] > https://lists.sourceforge.net/lists/listinfo/bibdesk-users ------------------ Adam M. Goldstein PhD, MSLIS -- [hidden email] http://www.shiftingbalance.org http://www.twitter.com/shiftingbalance -- http://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=180621 -- Associate Editor Reviews Editor Evolution: Education & Outreach http://www.springer.com/life+sci/journal/12052 -- Spellman 205 (914) 637-2717 (msg) -- Dept of Philosophy Iona College 715 North Avenue New Rochelle NY 10801 http://www.iona.edu/faculty/agoldstein ------------------------------------------------------------------------------ Learn how Oracle Real Application Clusters (RAC) One Node allows customers to consolidate database storage, standardize their database environment, and, should the need arise, upgrade to a full multi-node Oracle RAC database without downtime or disruption http://p.sf.net/sfu/oracle-sfdevnl _______________________________________________ Bibdesk-users mailing list [hidden email] https://lists.sourceforge.net/lists/listinfo/bibdesk-users |
smime.p7s (2K) |
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In reply to this post by Rafael Cruz
BibDesk > Preferences
Go to the TeX Preview preference pane. You will see a button for "Edit TeX Template." Push it. A part of a LaTeX document will open in whatever text editor your system automatically chooses, TextEdit, unless you've changed it. insert \usepackage{hyperref} on the line before \begin{document} Save the file and close it. Try again. I would just leave it that way if it works because you are going to have url's in references later on. Re Christiaan's comment in the email he just added to this thread, we are assuming that you are using TeX to typeset your documents and BibTeX to store your bibliographic data. Of course, LaTeX did run when you tried it before to get the error, so maybe it's just learning BibDesk. On Dec 23, 2010, at 7:31 PM, Rafael Cruz wrote: > Hi Christiaan, thanks for the quick response! > > I read the log (and saw this "\usepackage"), but I have no idea how to do this. Do I have to edit preview template? > (I'm really new to BibDesk (I'm using it for 1-2 weeks)). > > Thanks in advance. > > Rafael Cruz > [hidden email] > > > > On Thu, Dec 23, 2010 at 10:22 PM, Christiaan Hofman <[hidden email]> wrote: > Did you read the warning in the log? It says you probably need a \usepackage. You need one to define the \url command, as noted by the error message in the log. > > Christiaan > > On Dec 24, 2010, at 1:00, Rafael Cruz wrote: > > > > > Hi, > > > > I'm willing to use vancouver.bst as my BibDesk preview style. Here what I > > did: > > > > * Installed MacTex-2010 (http://www.tug.org/mactex/) > > * Downloaded vancouver.bst > > (http://www.ctan.org/tex-archive/biblio/bibtex/contrib/vancouver/) > > * Manually created ~/Library/texfm/bibtex/bst/ > > * Moved vancouver.bst to the folder above. > > * BibDesk Preferences>Tex Preview>BibTex style "vancouver" (without > > cotes). > > > > > > When I tried to use preview I got ***** ERROR: unable to create preview > > ***** > > > > Can I get some help? Thanks in advance. > > > > PS: Sorry if its a beginner issue, I'm new to BibDesk/Tex. > > > > Log output: > > > > TeX preview generation failed. Please review the log below to determine > > the cause. > > > > ***** WARNING: You are using a non-standard BibTeX style ***** > > The style "vancouver" may require additional \usepackage commands to > > function correctly. > > > > ---------- TeX log file ---------- > > File: > > "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.log" > > This is pdfTeX, Version 3.1415926-1.40.11 (TeX Live 2010) > > (format=pdflatex 2010.12.15) 17 DEC 2010 09:43 > > entering extended mode > > restricted \write18 enabled. > > %&-line parsing enabled. > > **bibpreview > > (./bibpreview.tex > > LaTeX2e <2009/09/24> > > Babel <v3.8l> and hyphenation patterns for english, dumylang, > > nohyphenation, ge > > rman-x-2009-06-19, ngerman-x-2009-06-19, ancientgreek, ibycus, arabic, > > armenian > > , basque, bulgarian, catalan, pinyin, coptic, croatian, czech, danish, > > dutch, u > > kenglish, usenglishmax, esperanto, estonian, farsi, finnish, french, > > galician, > > german, ngerman, swissgerman, monogreek, greek, hungarian, icelandic, > > assamese, > > bengali, gujarati, hindi, kannada, malayalam, marathi, oriya, panjabi, > > tamil, > > telugu, indonesian, interlingua, irish, italian, kurmanji, lao, latin, > > latvian, > > lithuanian, mongolian, mongolianlmc, bokmal, nynorsk, polish, > > portuguese, roma > > nian, russian, sanskrit, serbian, slovak, slovenian, spanish, swedish, > > turkish, > > turkmen, ukrainian, uppersorbian, welsh, loaded. > > (/usr/local/texlive/2010/texmf-dist/tex/latex/base/article.cls > > Document Class: article 2007/10/19 v1.4h Standard LaTeX document class > > (/usr/local/texlive/2010/texmf-dist/tex/latex/base/size10.clo > > File: size10.clo 2007/10/19 v1.4h Standard LaTeX file (size option) > > ) > > \c@part=\count79 > > \c@section=\count80 > > \c@subsection=\count81 > > \c@subsubsection=\count82 > > \c@paragraph=\count83 > > \c@subparagraph=\count84 > > \c@figure=\count85 > > \c@table=\count86 > > \abovecaptionskip=\skip41 > > \belowcaptionskip=\skip42 > > \bibindent=\dimen102 > > ) (./bibpreview.aux) > > \openout1 = `bibpreview.aux'. > > > > LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 14. > > LaTeX Font Info: ... okay on input line 14. > > LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 14. > > LaTeX Font Info: ... okay on input line 14. > > LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 14. > > LaTeX Font Info: ... okay on input line 14. > > LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 14. > > LaTeX Font Info: ... okay on input line 14. > > LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 14. > > LaTeX Font Info: ... okay on input line 14. > > LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 14. > > LaTeX Font Info: ... okay on input line 14. > > (./bibpreview.bbl > > ! Undefined control sequence. > > l.9 \newblock Available from: \url > > > > {http://www.ncbi.nlm.nih.gov/pubmed/201482... > > The control sequence at the end of the top line > > of your error message was never \def'ed. If you have > > misspelled it (e.g., `\hobx'), type `I' and the correct > > spelling (e.g., `I\hbox'). Otherwise just continue, > > and I'll forget about whatever was undefined. > > > > > > Underfull \hbox (badness 2932) in paragraph at lines 4--10 > > []\OT1/cmr/m/n/10 Hardie AD, Naik M, Hecht EM, Chan-darana H, Man-nelli > > L, Babb > > JS, et al. Di-ag-no- > > [] > > > > > > Underfull \hbox (badness 1931) in paragraph at lines 4--10 > > \OT1/cmr/m/n/10 sis of liver metas-tases: value of diffusion-weighted > > MRI com-p > > ared with gadolinium-enhanced > > [] > > > > > > Underfull \hbox (badness 2158) in paragraph at lines 4--10 > > \OT1/cmr/m/n/10 MRI. Eu-ro-pean Ra-di-ol-ogy. 2010 > > Jun;20(6):1431--1441. PMID > > : 20148251. Avail-able from: > > [] > > > > ) [1 > > > > {/usr/local/texlive/2010/texmf-var/fonts/map/pdftex/updmap/pdftex.map}] > > (./bibp > > review.aux) ) > > Here is how much of TeX's memory you used: > > 212 strings out of 493747 > > 2328 string characters out of 3143545 > > 49070 words of memory out of 3000000 > > 3585 multiletter control sequences out of 15000+200000 > > 4245 words of font info for 16 fonts, out of 3000000 for 9000 > > 714 hyphenation exceptions out of 8191 > > 23i,4n,19p,154b,108s stack positions out of > > 5000i,500n,10000p,200000b,50000s > > </usr/local/texlive/2010/texmf-dist/fonts/type1/public/amsfonts/cm > > /cmr10.pfb> > > Output written on bibpreview.pdf (1 page, 21247 bytes). > > PDF statistics: > > 12 PDF objects out of 1000 (max. 8388607) > > 7 compressed objects within 1 object stream > > 0 named destinations out of 1000 (max. 500000) > > 1 words of extra memory for PDF output out of 10000 (max. 10000000) > > > > > > > > ---------- BibTeX log file ------- > > File: > > "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.blg" > > This is BibTeX, Version 0.99d (TeX Live 2010) > > Capacity: max_strings=35307, hash_size=35307, hash_prime=30011 > > The top-level auxiliary file: bibpreview.aux > > The style file: vancouver.bst > > Reallocated glb_str_ptr (elt_size=4) to 20 items from 10. > > Reallocated global_strs (elt_size=5001) to 20 items from 10. > > Reallocated glb_str_end (elt_size=4) to 20 items from 10. > > Reallocated wiz_functions (elt_size=4) to 6000 items from 3000. > > Database file #1: bibpreview.bib > > You've used 1 entry, > > 3146 wiz_defined-function locations, > > 645 strings with 4804 characters, > > and the built_in function-call counts, 2664 in all, are: > > = -- 274 > >> -- 28 > > < -- 0 > > + -- 14 > > - -- 7 > > * -- 253 > > := -- 327 > > add.period$ -- 6 > > call.type$ -- 1 > > change.case$ -- 0 > > chr.to.int$ -- 0 > > cite$ -- 1 > > duplicate$ -- 139 > > empty$ -- 277 > > format.name$ -- 8 > > if$ -- 592 > > int.to.chr$ -- 0 > > int.to.str$ -- 1 > > missing$ -- 16 > > newline$ -- 10 > > num.names$ -- 1 > > pop$ -- 20 > > preamble$ -- 1 > > purify$ -- 0 > > quote$ -- 0 > > skip$ -- 28 > > stack$ -- 0 > > substring$ -- 591 > > swap$ -- 37 > > text.length$ -- 0 > > text.prefix$ -- 0 > > top$ -- 0 > > type$ -- 0 > > warning$ -- 0 > > while$ -- 13 > > width$ -- 2 > > write$ -- 17 > > > > > > ---------- BibDesk info ---------- > > <BDSKTeXTask: 0x6bdd40> { > > ivars: > > delegate = "(null)" > > file name = "bibpreview" > > template = "/Users/LaaZ/Library/Application > > Support/BibDesk/previewtemplate.tex" > > TeX file = > > "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.tex" > > BibTeX file = > > "/var/folders/bp/bpFFpHUbGkC2UjLAfG5E-E+++TI/-Tmp-/bibdesk.dlzzy0/bibpreview/bibpreview.bib" > > TeX binary path = "/usr/texbin" > > Encoding = "Western (ASCII)" > > BibTeX style = "vancouver" > > Helper files = ( > > ) > > > > environment: > > SHELL = "/bin/bash" > > BIBINPUTS = "(null)" > > BSTINPUTS = "(null)" > > PATH = "/usr/bin:/bin:/usr/sbin:/sbin:/usr/texbin:/usr/texbin" } > > > > -- > > View this message in context: http://bibdesk-users.661331.n2.nabble.com/Need-some-help-with-vancouver-bst-tp5862925p5862925.html > > Sent from the bibdesk users mailing list archive at Nabble.com. > > > ------------------------------------------------------------------------------ > Learn how Oracle Real Application Clusters (RAC) One Node allows customers > to consolidate database storage, standardize their database environment, and, > should the need arise, upgrade to a full multi-node Oracle RAC database > without downtime or disruption > http://p.sf.net/sfu/oracle-sfdevnl > _______________________________________________ > Bibdesk-users mailing list > [hidden email] > https://lists.sourceforge.net/lists/listinfo/bibdesk-users > > ------------------------------------------------------------------------------ > Learn how Oracle Real Application Clusters (RAC) One Node allows customers > to consolidate database storage, standardize their database environment, and, > should the need arise, upgrade to a full multi-node Oracle RAC database > without downtime or disruption > http://p.sf.net/sfu/oracle-sfdevnl_______________________________________________ > Bibdesk-users mailing list > [hidden email] > https://lists.sourceforge.net/lists/listinfo/bibdesk-users ------------------ Adam M. Goldstein PhD, MSLIS -- [hidden email] http://www.shiftingbalance.org http://www.twitter.com/shiftingbalance -- http://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=180621 -- Associate Editor Reviews Editor Evolution: Education & Outreach http://www.springer.com/life+sci/journal/12052 -- Spellman 205 (914) 637-2717 (msg) -- Dept of Philosophy Iona College 715 North Avenue New Rochelle NY 10801 http://www.iona.edu/faculty/agoldstein ------------------------------------------------------------------------------ Learn how Oracle Real Application Clusters (RAC) One Node allows customers to consolidate database storage, standardize their database environment, and, should the need arise, upgrade to a full multi-node Oracle RAC database without downtime or disruption http://p.sf.net/sfu/oracle-sfdevnl _______________________________________________ Bibdesk-users mailing list [hidden email] https://lists.sourceforge.net/lists/listinfo/bibdesk-users |
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